# Release notes: Latest releases
| Major versions | Minor versions |
|---|---|
| v2.4 | |
| v2.3 | v2.3.1, v2.3.2 |
| v2.2 | v2.2.1, v2.2.1a, v2.2.2, v2.2.3, v2.2.4 |
| v2.1 | v2.1.1, v2.1.2 |
| v2.0 | v2.0.1, v2.0.2, v2.0.3 |
# >> Version 2.4.0
Release date: 18.03.2022
# Codebase
- generic anno config parser
# Data sources
- Updated Clinvar to version 20220303.
# >> Version 2.3.2
Release date: 23.02.2022
# Codebase
- Error log output is truncated in `ops/sync_data.py
- Trouble with permissions when indexing
FASTAin container root folder
# Data sources
- Updated Clinvar to version 20220203.
# >> Version 2.3.1
Release date: 12.02.2022
# Codebase
- Use docker:// when USE_REGISTRY is set
- Various minor build fixes
# Data sources
- Updated RefGene to version 20210928.
- Updated Clinvar to version 20220106.
# >> Version 2.3.0
Release date: 21.09.2021
# Codebase
- Moved to Pipenv/Pipfile for dependency management and updating packages.
- Upgraded Python to v3.9.
- Upgraded PostgreSQL to version 13.
- Upgraded Docker base image to Debian 11 (Bullseye).
- Improvements to code base and dev environment.
# Data sources
- Upgraded gnomAD to v2.1.1.
- Upgraded VEP to v104.3.
- Updated RefSeq to version 20201022.
- Removed miRNA from RefSeq data to mitigate bug in VEP (opens new window).
- Upgraded biocommons seqrepo to version 2021-01-29.
- Updated UTA to version 20210129.
- Updated ClinVar to version 20210826.
# Version 2.2.4
Release date: 11.06.2021
# Codebase
- Added force flag to get a clean data folder.
# Version 2.2.3
Release date: 10.06.2021
# Codebase
- Anno now allows import of empty VCFs.
# Data sources
- Updated ClinVar to version 20210529.
# Version 2.2.2
Release date: 23.02.2021
# Codebase
- Minor improvements to backend.
# Data sources
- Updated ClinVar to version 20210222.
# Version 2.2.1a
Release date: 17.12.2020
# Data sources
- Updated ClinVar to version 20201203.
# Version 2.2.1
Release date: 15.12.2020
# Codebase
- Fixed bug where VCFs with ALT variants with missing variants were erroneously set to
..
# >> Version 2.2
Release date: 10.12.2020
# Codebase
- Moved all code to Python 3.
- Non-default ports are now allowed for Postgres.
# Data sources
- Updated UTA to version 20201027 (moved to DigitalOcean and part of
datasets.json).
# Version 2.1.2
Release date: 24.11.2020
# Codebase
- Removed link to sliced VCF.
- Added proper handling of GATK star alleles (add code to remove star alleles that are conflicting with downstream tools).
- Fixed issue with
PYTHONPATHin Python 3.
# Version 2.1.1
Release date: 16.11.2020
# Codebase
- Fixed issue with slicing of multiallelic blocks.
# >> Version 2.1
Release date: 23.09.2020
# Codebase
- Fixed pyrsistent version to 0.15.7 (Python 2 compatible).
- Moved vt decompose and vt normalize before slicing, to avoid slicing on non-normalized data.
- Allowed
ANNOBUILDER_IMAGE_NAMEto be specified. - Added CI-test to check
datasets.jsonagainst DigitalOcean. - Fixed remaining issues with duplicates in
vcfanno_config.toml. - Added license.
# Data sources
- Updated ClinVar to version 20200907.
# Version 2.0.3
Release date: 13.07.2020
# Codebase
- Fixed issue with duplicates in
vcfanno_config.toml. - Added possibility to override envs in Makefile.
- Added caching for Singularity.
# Data sources
- Updated ClinVar to version 20200626.
# Version 2.0.2
Release date: 18.05.2020
# Data sources
- Updated ClinVar to version 20200514.
# Version 2.0.1
Release date: 13.05.2020
# Data sources
- Added option to set VEP buffer size in
annotate.shand environment variable.
# >> Version 2.0
Release date: 13.05.2020
- Initial public release.